Celiac: Digestion and Absorption Challenges Call for Supplemental Nutrients

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Managing celiac disease can be complex, but incorporating nutritional supplements into your routine can provide valuable support. Alongside a gluten-free diet, supplements can help address nutritional deficiencies, promote gut health, and ease symptoms associated with this autoimmune condition. This article examines the evidence-based benefits of different nutritional supplements for celiac disease management, helping you make informed choices about your health.

What Is Celiac Disease?

Celiac disease is an autoimmune disorder triggered by the consumption of gluten, found in wheat, barley, and rye. It leads to immune-mediated damage to the lining of the small intestine, resulting in symptoms like abdominal pain, bloating, diarrhea, and nutrient deficiencies. While a lifelong gluten-free diet is the primary treatment, some people may still experience symptoms or struggle to maintain adequate nutrient levels.

Nutritional supplements play a vital role in supporting persons with celiac disease by filling nutritional gaps, promoting gut health, and alleviating symptoms. These supplements can help ensure that persons with celiac disease receive essential nutrients they may not obtain solely from their diet, supporting overall health alongside adherence to a gluten-free diet.

What Food and Lifestyle Factors Are Important For Managing Celiac Disease?

  • Gluten-Free Diet: Celiac disease requires strict adherence to a gluten-free diet. This means avoiding foods that contain wheat, barley, and rye, as well as their derivatives. It’s essential to read food labels carefully and be aware of hidden sources of gluten, such as sauces, marinades, and processed foods.
  • Whole, Natural Foods: Whole, natural foods like fruits, vegetables, lean proteins, and gluten-free grains provide essential nutrients without gluten. These foods are also rich in vitamins, minerals, and antioxidants, supporting overall health.
  • Gluten-Free Substitutes: Fortunately, there are many gluten-free alternatives available for common staples like bread, pasta, and baking ingredients. Look for products labeled “gluten-free” to ensure they meet the necessary standards and are free from contamination.
  • Cross-Contamination: Cross-contamination can occur when gluten-free foods come into contact with gluten-containing surfaces or utensils. To prevent this, use separate cooking utensils, cutting boards, and cooking surfaces for gluten-free foods. When dining out, communicate your dietary needs to restaurant staff and ask about their procedures for preventing cross-contamination.
  • Nutrient Supplementation: Due to damage to the small intestine, persons with celiac disease may have difficulty absorbing certain nutrients, such as iron, calcium, vitamin D, and B vitamins. Your healthcare provider may recommend supplements to address deficiencies and ensure optimal nutrition.
  • Regular Monitoring: Regular follow-up appointments with healthcare providers, including gastroenterologists and dietitians, are essential for monitoring the condition, assessing nutrient levels, and addressing any concerns or challenges. Blood tests may be conducted to check for antibodies associated with celiac disease and to monitor nutrient levels over time.
  • Support Networks: Joining support groups or connecting with others who have celiac disease can provide valuable tips, encouragement, and resources for managing the condition effectively. These networks can offer insights into coping strategies, share recipes and product recommendations, and provide emotional support on the journey to living gluten-free.

Dietary supplements are not designed to diagnose, treat, cure, or prevent any disease. This article aims to offer valuable insights into which nutritional supplements have undergone scientific study and shown promise in supporting specific health conditions. We break down the research, so you can work with your medical providers to make informed decisions about adding supplements to your health regimen. For personalized advice tailored to your needs, we recommend consulting with a registered dietitian in addition to your primary care provider.

Check with your physician when adding supplements. While supplements are generally safe for most people, do not add nutritional supplements without your physician’s specific approval if you are pregnant or nursing, are undergoing cancer treatment, have a history of organ transplant, liver or kidney disease, or take medications that interact with supplements.


  • Nutrients to Heal the Gut:
    • L-Glutamine: Keeping the tight junctions in the intestines strong and working well has been shown to help with conditions like inflammatory bowel disease and celiac disease. Taking glutamine supplements might be helpful for people with celiac because they can improve the function of these tight junctions. [PMC5454963]
    • Zinc Carnosine: Helps heal the inner surface of the intestines, which can be significantly weakened and flattened in people with celiac disease, thereby aiding in the recovery of their gut’s ability to properly absorb nutrients. [PMC7146259]
    • Multivitamin: Celiac malabsorption causes deficiencies across the spectrum of 40+ nutrients, all of which are needed for each cell. These nutrients help repair the damaged gut lining, promote better nutrient absorption, and support overall recovery while following a gluten-free diet. [PMC7071237]
  • Anti-Inflammatory:
    • Omega-3 Fatty Acids: Omega-3 fatty acids, particularly docosahexaenoic acid (DHA), are well recognized for their anti-inflammatory properties. DHA can influence the function of dendritic cells, which are crucial components of the immune system in the gut. By modifying how these cells respond and secrete inflammatory cytokines, DHA can help reduce inflammation in the gut. This action makes it potentially beneficial for conditions characterized by gut inflammation, such as celiac disease. [PMID: 18632990]
  • Frequent Deficiencies: Even with a long-term gluten-free diet, studies have shown that people with celiac disease who follow a long-term gluten-free diet with good compliance still experience significant rates of micronutrient deficiencies: up to 30% for vitamin B12, 40% for iron, 20% for folic acid, 25% for vitamin D, 40% for zinc, and 20% for magnesium, with a 3.6% deficiency rate in children for calcium. [PMC6681258]
    • Iron: Iron deficiency anemia is common in persons with celiac disease due to impaired absorption in the small intestine. Iron supplements may be prescribed to replenish iron stores and alleviate symptoms such as fatigue and weakness. Reports suggest that ferrous sulfate is poorly absorbed in celiac disease. [PMC8156426]
    • Calcium: Celiac disease often results in deficiencies in calcium, an essential mineral for bone health. Supplementing with calcium can help prevent bone weakening and reduce the risk of fractures in individuals with celiac disease.
    • Vitamin D: Deficiency of Vitamin D is common in celiac disease due to malabsorption issues. Adequate vitamin D supplementation is crucial for bone health and can help prevent osteoporosis in those affected by celiac disease. [PMC9735899] Deficiency may also be a part of the cause of celiac disease. [PMC7231074] Vitamin D dosages should be adjusted based on your blood level with many clinicians recommending an optimal Vitamin D level of 50-80 ng/ml. Vitamin D Labs (affiliate link) can be ordered in the NutriScape Lab Shop.
    • B Complex Vitamins: B vitamin supplementation significantly improved psychological well-being and reduced homocysteine levels in adults with longstanding celiac disease on a gluten-free diet, highlighting its potential value in managing the condition’s associated deficiencies and enhancing quality of life. [PMID: 19154566]
      • Vitamin B12: Celiac disease can interfere with the absorption of vitamin B12, which is crucial for nerve function and the formation of red blood cells. Supplementing with vitamin B12 can help manage celiac disease symptoms, such as fatigue and neurological issues, and improve overall well-being.
      • Folate: Deficiency of folate is common in celiac. Supplementation is important because intestinal damage can reduce the absorption of this essential nutrient, which is necessary for DNA synthesis and healthy cell division. Ensuring adequate folate intake helps prevent anemia and supports overall health recovery. [PMID: 24195595]
    • Magnesium: About 20% of adults with celiac disease have magnesium deficiencies at diagnosis and while on a gluten-free diet, due to malabsorption, lower magnesium content in gluten-free products, ongoing intestinal inflammation, and reduced dietary intake. [PMC6681258]
    • Vitamin E: People with celiac disease often struggle with getting enough vitamin E, regardless of how carefully they manage their diet. Considering vitamin supplements, particularly right after being diagnosed or if they accidentally consume gluten, can be crucial for maintaining their overall health. [PMC5209463]
  • Probiotics: Probiotic supplements, which contain beneficial bacteria, may help restore balance to the gut microbiota, which can be disrupted in persons with celiac disease. [PMID: 32740074] Research suggests that probiotics could reduce symptoms like bloating and diarrhea, as demonstrated in a study where children with celiac disease who took probiotics alongside a gluten-free diet experienced fewer episodes of diarrhea compared to those on the diet alone. [PMC8912170]
  • Digestive Enzymes: Enzyme supplements can be a helpful safety net for people with celiac disease, as they might help reduce the impact of accidental gluten exposure by helping break it down more effectively. This may be useful when cross contamination or very small amounts of gluten are present, but will not help with the digestion of gluten containing grains. [PMC7400306]

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Supplement Safety Information

Iron, Calcium and Vitamin D, Vitamin B12 and Folate, Magnesium, Probiotics, Digestive Enzymes, Omega-3 Fatty Acids, L-Glutamine, and Vitamin E are safe and beneficial for managing celiac disease. These nutritional supplements address various deficiencies commonly associated with the condition, such as anemia, bone health, nerve function, gut microbiota balance, inflammation, and intestinal permeability. Additionally, research supports their effectiveness in improving symptoms and overall health in persons with celiac disease. When taken as directed and in appropriate doses, these supplements can play a crucial role in supporting the health and quality of life of those with celiac disease without posing significant risks or side effects.

Medication Interactions:

  • Antacids, Proton Pump Inhibitors (PPIs), Tetracycline Antibiotics: Iron supplements may interact with these medications, reducing their absorption and effectiveness.
  • Bisphosphonates, Thyroid Medications, Certain Antibiotics: Calcium and vitamin D supplements may interfere with the absorption of these medications. To avoid interactions, it’s advisable to take these supplements at a different time of day than medications that may be affected.
  • Proton Pump Inhibitors (PPIs), Metformin: Vitamin B12 supplements may interact with these medications, possibly reducing their absorption. Close monitoring of vitamin B12 levels and considering supplementation may be necessary.
  • Methotrexate, Phenytoin, Sulfasalazine: Folate supplements may interact with these medications, reducing their effectiveness. Close monitoring of folate levels and possible adjustments to medication dosages may be necessary when taking folate supplements concurrently.
  • Bisphosphonates, Antibiotics, Diuretics: Magnesium supplements may interact with these medications, altering their absorption or excretion. It’s advisable to take magnesium supplements at a different time of day than medications to minimize possible interactions.
  • Antibiotics: Probiotic supplements may interact with antibiotics, which might reduce their effectiveness. It’s recommended to take probiotics at a different time of day than antibiotics to minimize the impact on gut microbiota balance.
  • Antacids, Proton Pump Inhibitors (PPIs), H2 Blockers: Digestive enzyme supplements may interact with these medications, and may alter their effectiveness. It’s advisable to take digestive enzyme supplements at a different time of day than medications that may be affected.
  • Blood Thinners (Anticoagulants), Cholesterol-lowering Drugs: Omega-3 supplements may interact with these medications, increasing the risk of bleeding or other adverse effects. Close monitoring and possible adjustments to medication dosages may be necessary when taking omega-3 supplements concurrently.
  • Chemotherapy Drugs: L-Glutamine supplements may interact with these medications, and could alter their effectiveness. It’s important to consult with a healthcare provider before starting L-glutamine supplements, especially if undergoing cancer treatment.
  • Blood Thinners (Anticoagulants), Some Cholesterol-lowering Drugs: Vitamin E supplements may interact with these medications, increasing the risk of bleeding or other adverse effects. Close monitoring and possible adjustments to medication dosages may be necessary when taking vitamin E supplements concurrently.

Supplement Interactions:

  • Iron: When taken together, calcium supplements may decrease iron absorption, so it’s advisable to take them at different times to avoid this interaction. Additionally, high doses of iron supplements may reduce folate absorption, necessitating monitoring of folate levels when taken concurrently.
  • Calcium and Vitamin D: To minimize interference with magnesium absorption, it’s best to take calcium supplements at different times of the day. Furthermore, while vitamin E may enhance vitamin D absorption, excessive vitamin E supplementation should be avoided.
  • Folate (Folic Acid) and Vitamin B12: Both folate and vitamin B12 are essential for overall health, and deficiencies in one can mask deficiencies in the other. Therefore, it’s crucial to maintain adequate levels of both nutrients.
  • Magnesium: Taking high doses of calcium supplements may interfere with magnesium absorption, so it’s recommended to take them separately.
  • Probiotics: Probiotics may enhance iron absorption and synergize with L-glutamine to support gut health. However, they may be depleted by antibiotic use, so it’s best to take them separately.
  • Digestive Enzymes: Digestive enzymes and probiotics may complement each other in supporting digestive health. Combining them may enhance their effectiveness.
  • Omega-3 Fatty Acids: Vitamin E may enhance the absorption and effectiveness of omega-3 fatty acids when taken together.
  • L-Glutamine: L-Glutamine and probiotics may work synergistically to support gut health and integrity. Their combined use may enhance their beneficial effects.
  • Vitamin E: While omega-3 fatty acids and vitamin E may have synergistic effects in reducing inflammation and supporting cardiovascular health when taken together, excessive vitamin E supplementation should be avoided due to possible adverse effects.

Food First!

Although this article discusses supplements in detail, don’t forget that we are absolutely committed to the “Food First” approach to nutrition. When it comes to your health, the totality of your eating habits far surpasses the impact of individual nutrients or any single supplement you consume. Even though this article doesn’t delve into the broader picture of your overall diet, it’s crucial to keep this element at the forefront of our minds. Your food needs to provide all the vitamins, minerals, fiber, and phytochemicals to nourish your body systems down to the cellular level.

Food choices, rather than supplements, are the most critical factors for a healthy gut microbiome. These trillions of tiny inhabitants in your gut affect your brain waves; they orchestrate your immune system. They possess the power to create molecules that can switch genes on or off and are even capable of synthesizing neurotransmitters. Opting for organic foods and steering clear of plastic packaging (including those labeled BPA-free) is a smart move to limit toxin exposure. The sum of all these parts leads to a powerful conclusion: the ultimate key to your health lies in the quality and balance of the food you consume. Supplements are secondary.

What To Eat

What Lab Tests Might Be Helpful In Managing Celiac Disease?

  • Celiac Disease Antibody Tests: These blood tests measure the levels of specific antibodies produced by the immune system in response to gluten ingestion. The primary antibodies tested are anti-tissue transglutaminase (tTG) antibodies, anti-endomysial antibodies (EMA), and deamidated gliadin peptide (DGP) antibodies. Elevated levels of these antibodies can show active celiac disease and help confirm the diagnosis.
  • Genetic Testing: Genetic testing can identify the presence of specific human leukocyte antigen (HLA) genes associated with celiac disease, such as HLA-DQ2 and HLA-DQ8. While the presence of these genes is necessary for the development of celiac disease, it is not sufficient for diagnosis. However, the absence of these genes makes celiac disease highly unlikely, providing valuable information in certain cases.
  • Nutrient Labs: Blood tests to assess levels of certain nutrients, such as iron, vitamin B12, folate, vitamin D, and calcium, can help identify deficiencies common in persons with celiac disease. Monitoring these levels over time can guide nutritional supplementation and evaluate the effectiveness of treatment.

To Sum It Up

In addition to a strict gluten free diet, incorporating specific nutritional supplements, when needed, can help heal the gut and support nutrient levels. These include iron, calcium, vitamin D, vitamin B12, folate, magnesium, probiotics, digestive enzymes, omega-3 fatty acids, and L-glutamine into your daily routine can offer various health benefits for managing celiac disease. These supplements help address deficiencies commonly associated with celiac disease, support gut health, and relieve symptoms such as fatigue, weakness, and digestive issues. By filling nutritional gaps and promoting overall health, these supplements play a vital role in supporting persons living with celiac disease.


This Article is Not a Substitute for Medical Advice

Dietary supplements are not designed to diagnose, treat, cure, or prevent any disease. The Supplement Sciences website seeks to provide comprehensive access to the most relevant supplement information along with convenient online ordering. We do not provide medical advice and cannot guarantee that every product suggested is completely without risk. Since each person is unique in their health history and medication use, it is important to discuss supplements with your personal physician. Specifically, pregnant women and individuals being treated for cancer or liver or kidney problems must consult their physician about every nutritional supplement they plan to take. People taking medications for the treatment of HIV or with a history of organ transplant must not take supplements without consulting with their physician.


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